Full Publications (Google Scholar Profile)

Selected Journal Paper

Subpopulation Detection and Their Comparative Analysis across Single-Cell Experiments with scPopCorn Yijie Wang, Jan Honinka, and Teresa M. Przytycka. Cell Systems, 8(6): 506-513, 2019

AptaBlocks: Accelerating the Design of RNA-based Drug Delivery Systems Yijie Wang, Jan Hoinka, Yong Liang, Tomasz Adamus, Piotr Swiderski, and Teresa M. Przytycka. Nucleic Acids Research, 46(16): 8133-8142, 2018

Reprogramming of regulatory network using expression uncovers sex-specific gene regulation in Drosophila Yijie Wang*, Dong-Yeon Cho*, Hangnoh Lee, Justin Fear, Brian Oliver, and Teresa M. Przytycka. Nature Communications, 9(1): 4061, 2018

Selected Conference Paper

Accurate sub-population detection and mapping across single cell experiments with PopCom. Yijie Wang, Jan Honinka, and Teresa M. Przytycka. The 23rd International Conference on Research in Computational Molecular Biology. RECOMB 2019.

AptaBlocks: Accelerating the Design of RNA-based Drug Delivery Systems. Yijie Wang, Jan Hoinka, Piotr Swiderski, and Teresa M. Przytycka. The 22rd International Conference on Research in Computational Molecular Biology. RECOMB 2018.

NetREX: Network Rewiring using EXpression - Towards Context Specific Regulatory Networks. Yijie Wang*, Dong-Yeon Cho*, Hangnoh Lee, Brian Oliver, and Teresa M. Przytycka. The 21rd International Conference on Research in Computational Molecular Biology. RECOMB 2017.(Best Paper Award)

A Novel Subgradient-based Optimization Algorithm for Blockmodel Functional Module Identification. Yijie Wang and Xiaoning Qian. The 11th Asia Pacific Bioinformatics Conference. APBC 2013.(Best Paper Award)

[* denotes equal contribution]